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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs73705122 chr7:76337660 T/C POMZP3 chr7:76239303-76256578:- 1.09 5.85 3.35E-7 Box Plot
ACC rs73705124 chr7:76337676 T/C POMZP3 chr7:76239303-76256578:- 1.09 5.85 3.35E-7 Box Plot
ACC rs7396866 chr11:74698928 G/A XRRA1 chr11:74518784-74660245:- 0.69 5.6 8.29E-7 Box Plot
ACC rs74239192 chr12:48777830 T/C COL2A1 chr12:48366748-48398269:- 1.26 5.13 4.4E-6 Box Plot
ACC rs7432837 chr3:93809151 T/C STX19 chr3:93733213-93747454:- 0.77 6.21 8.82E-8 Box Plot
ACC rs74393176 chr5:96280248 G/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs7452605 chr6:86240951 A/G SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot
ACC rs7483351 chr11:74720593 G/T XRRA1 chr11:74518784-74660245:- 0.67 5.42 1.56E-6 Box Plot
ACC rs7512393 chr1:213055184 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs75155679 chr7:6669271 C/T C7orf70 chr7:6369041-6388590:- 0.69 5.22 3.15E-6 Box Plot
ACC rs7516718 chr1:213051462 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7516817 chr1:213051578 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7519166 chr1:213057595 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7522693 chr1:213058871 C/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs7522877 chr1:213059003 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot